So your dealer did it. They probably didn't file a claim for that bottle of ATF since it shoulda been done during PDI. HMA pays the dealers for PDI labor+parts. Why Hyundai would ask the dealers to check the ATF level must be a mystery to you if you think they want to keep their prices low by underfilling trannies by "a quart here, a quart there"...
http://www.hmaservice.com/webtech/iindex.asp?id=394890107#_394890107
My dealer did not top it off at delivery. In fact, it was a different dealer almost 3 months later. I told them it was lower than it should have been, they said "OK, we'll take care of it." When they gave me my car back they told me that it was indeed low and that they added some more (as I said, the exact amount escapes me, I believe that it was around 3/4 of a quart). My invoice said that they added ATF and that it was billed to "Warranty".